WeNMR: structural biology on the grid

T.A. Wassenaar, M. van Dijk, N. Loureiro-Ferreira, G. van der Schot, S.J. de Vries, C.P.F. Schmitz, J. van der Zwan, R. Boelens, A.M.J.J. Bonvin

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

The WeNMR (http://www.wenmr.eu) project is an EU-funded international effort to streamline and automate structure determination from Nuclear Magnetic Resonance (NMR) data. Conventionally calculation of structure requires the use of various softwares, considerable user expertise and ample computational resources. To facilitate the use of NMR spectroscopy in life sciences the eNMR/WeNMR consortium has set out to provide protocolized services through easy-to-use web interfaces, while still retaining sufficient flexibility to handle more specific requests. Thus far, a number of programs often used in Structural Biology have been made available through portals, including HADDOCK, XPLOR-NIH, CYANA and CS-ROSETTA, MARS, MDDNMR. The implementation of these services, in particular the distribution of calculations to the Grid, involves a novel mechanism for submission and handling of jobs that is independent of the type of job being run. With over 280 registered users (April 2011), eNMR/WeNMR is currently one of the largest Virtual Organization (VO) in life sciences. With its large and worldwide user community, WeNMR has become the first Virtual Research Community officially recognized by the European Grid Infrastructure (EGI)
Original languageEnglish
Title of host publicationIWSG-Life 2011
Subtitle of host publicationScience Gateways for Life Sciences 2011
EditorsGabor Terstyanszky, Tamas Kiss
PublisherCEUR WS
Publication statusPublished - 8 Jun 2011

Bibliographical note

3rd International Workshop on Science Gateways for Life Sciences

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