TY - JOUR
T1 - Utilizing a biology-driven approach to map the exposome in health and disease: An essential investment to drive the next generation of environmental discovery
AU - Chung, M.K.
AU - Rappaport, S.M.
AU - Wheelock, C.E.
AU - Nguyen, V.K.
AU - van der Meer, T.P.
AU - Miller, G.W.
AU - Vermeulen, R.
AU - Patel, C.J.
N1 - Funding Information:
This study was supported by grants from the U.S. National Institutes of Health (NIH) through the National Institute for Environmental Health Sciences (S.M.R.: P01ES018172, P50ES018172, and P42ES004705; V.K.N.: R01ES028802), the Swedish Heart-Lung Foundation (C.E.W.: Hjärt-Lungfonden 20170736 and 20180290), the NIH (G.W.M.: U2CES030163 and RC2 DK118619), the Gravitation program of the Dutch Ministry of Education, Culture, and Science and the Netherlands Organization for Scientific Research through the EXPOSOME-NL (R.V.; 024.004.017), the European Union’s Horizon 2020 research and innovation programme (R.V.: 874627), and the NIH through the National Institute for Allergy and Infectious Diseases (C.J.P.: AI127250) and the National Institute of Mental Health and National Institute of Allergy and Infectious Diseases (M.K.C: R01MH107205 and R01AI127250).
Publisher Copyright:
© 2021, Public Health Services, US Dept of Health and Human Services. All rights reserved.
PY - 2021/8
Y1 - 2021/8
N2 - BACKGROUND: Recent developments in technologies have offered opportunities to measure the exposome with unprecedented accuracy and scale. However, because most investigations have targeted only a few exposures at a time, it is hypothesized that the majority of the environmental determinants of chronic diseases remain unknown. OBJECTIVES: We describe a functional exposome concept and explain how it can leverage existing bioassays and high-resolution mass spectrometry for exploratory study. We discuss how such an approach can address well-known barriers to interpret exposures and present a vision of next-generation exposomics. DISCUSSION: The exposome is vast. Instead of trying to capture all exposures, we can reduce the complexity by measuring the functional exposome— the totality of the biologically active exposures relevant to disease development—through coupling biochemical receptor-binding assays with affinity purification–mass spectrometry. We claim the idea of capturing exposures with functional biomolecules opens new opportunities to solve critical problems in exposomics, including low-dose detection, unknown annotations, and complex mixtures of exposures. Although novel, biology-based measurement can make use of the existing data processing and bioinformatics pipelines. The functional exposome concept also complements conven-tional targeted and untargeted approaches for understanding exposure-disease relationships. CONCLUSIONS: Although measurement technology has advanced, critical technological, analytical, and inferential barriers impede the detection of many environmental exposures relevant to chronic-disease etiology. Through biology-driven exposomics, it is possible to simultaneously scale up discovery of these causal environmental factors. https://doi.org/10.1289/EHP8327.
AB - BACKGROUND: Recent developments in technologies have offered opportunities to measure the exposome with unprecedented accuracy and scale. However, because most investigations have targeted only a few exposures at a time, it is hypothesized that the majority of the environmental determinants of chronic diseases remain unknown. OBJECTIVES: We describe a functional exposome concept and explain how it can leverage existing bioassays and high-resolution mass spectrometry for exploratory study. We discuss how such an approach can address well-known barriers to interpret exposures and present a vision of next-generation exposomics. DISCUSSION: The exposome is vast. Instead of trying to capture all exposures, we can reduce the complexity by measuring the functional exposome— the totality of the biologically active exposures relevant to disease development—through coupling biochemical receptor-binding assays with affinity purification–mass spectrometry. We claim the idea of capturing exposures with functional biomolecules opens new opportunities to solve critical problems in exposomics, including low-dose detection, unknown annotations, and complex mixtures of exposures. Although novel, biology-based measurement can make use of the existing data processing and bioinformatics pipelines. The functional exposome concept also complements conven-tional targeted and untargeted approaches for understanding exposure-disease relationships. CONCLUSIONS: Although measurement technology has advanced, critical technological, analytical, and inferential barriers impede the detection of many environmental exposures relevant to chronic-disease etiology. Through biology-driven exposomics, it is possible to simultaneously scale up discovery of these causal environmental factors. https://doi.org/10.1289/EHP8327.
U2 - 10.1289/EHP8327
DO - 10.1289/EHP8327
M3 - Article
SN - 0091-6765
VL - 129
SP - 1
EP - 9
JO - Environmental Health Perspectives
JF - Environmental Health Perspectives
IS - 8
M1 - 085001
ER -