Tomosipo: fast, flexible, and convenient 3D tomography for complex scanning geometries in Python

Allard A Hendriksen, Dirk Schut, Willem Jan Palenstijn, Nicola Viganó, Jisoo Kim, Daniël M Pelt, Tristan Van Leeuwen, K Joost Batenburg

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Tomography is a powerful tool for reconstructing the interior of an object from a series of projection images. Typically, the source and detector traverse a standard path (e.g., circular, helical). Recently, various techniques have emerged that use more complex acquisition geometries. Current software packages require significant handwork, or lack the flexibility to handle such geometries. Therefore, software is needed that can concisely represent, visualize, and compute reconstructions of complex acquisition geometries. We present tomosipo, a Python package that provides these capabilities in a concise and intuitive way. Case studies demonstrate the power and flexibility of tomosipo.
Original languageEnglish
Pages (from-to)40494-40513
Number of pages20
JournalOptics Express
Volume29
Issue number24
DOIs
Publication statusPublished - 22 Nov 2021

Fingerprint

Dive into the research topics of 'Tomosipo: fast, flexible, and convenient 3D tomography for complex scanning geometries in Python'. Together they form a unique fingerprint.

Cite this