The use of Peptide Microarrays in the study of O-GlcNAcylation, Phosphorylation and their Crosstalk

Nedjateh Sharif

Research output: ThesisDoctoral thesis 1 (Research UU / Graduation UU)

Abstract

This thesis includes two parts. Part I, ‘Development of a peptide microarray method to study post-translational modifications’ and part II, ‘Toxicity of galectin-9 toward KRAS mutated CRC cells: pathway elucidation’. Part I aimed to study the posttranslational modifications (PTMs), O-GlcNAcylation/ de- O-GlcNAcylation, phosphorylation/ dephosphorylation, crosstalk between de-O-GlcNAcylation and dephosphorylation and finally O-GlcNAcylation of JAK2 JH1 kinase using short peptide substrates derived from their parental proteins. Part II of this thesis, ‘Toxicity of galectin-9 toward KRAS mutated CRC cells: pathway elucidation’, aimed to profile the STK and PTK activity of galectin-9 sensitive DLD-1 cancer cells using peptide microarrays. The goal was to identify the kinase pathways which are involved upon galectin-9 treatment and includes two chapters.
Original languageEnglish
QualificationDoctor of Philosophy
Awarding Institution
  • Utrecht University
Supervisors/Advisors
  • Pieters, Roland, Primary supervisor
  • Hilhorst, Riet, Co-supervisor, External person
Award date15 Mar 2023
Publisher
Print ISBNs978-94-6458-883-5
DOIs
Publication statusPublished - 15 Mar 2023

Keywords

  • galectin-9
  • RAS/ERK pathway
  • Kinase signaling pathway, Kinome profiling
  • phosphorylation
  • O-GlcNAcylation
  • peptide microarray
  • OGT
  • OGA
  • PTMs crosstalk

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