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The physiology and metabolic properties of a novel, low-abundance Psychrilyobacter species isolated from the anoxic Black Sea shed light on its ecological role

  • Royal Netherlands Institute for Sea Research - NIOZ

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Members of the Psychrilyobacter spp. of the phylum Fusobacteria have been recently suggested to be amongst the most significant primary degraders of the detrital organic matter in sulfidic marine habitats, despite representing only a small proportion (<0.1%) of the microbial community. In this study, we have isolated a previously uncultured Psychrilyobacter species (strains SD5(T) and BL5; Psychrilyobacter piezotolerans sp. nov.) from the sulfidic waters (i.e., 2000 m depth) of the Black Sea and investigated its physiology and genomic capability in order to better understand potential ecological adaptation strategies. P. piezotolerans utilized a broad range of organic substituents (carbohydrates and proteins) and, remarkably, grew at sulfide concentrations up to 32 mM. These flexible physiological properties were supported by the presence of the respective metabolic pathways in the genomes of both strains. Growth at varying hydrostatic pressure (0.1-50 MPa) was sustained by modifying its membrane lipid composition. Thus, we have isolated a novel member of the 'rare biosphere', which endures the extreme conditions and may play a significant role in the degradation of detrital organic matter sinking into the sulfidic waters of the Black Sea.
Original languageEnglish
Pages (from-to)899-910
Number of pages12
JournalEnvironmental Microbiology Reports
Volume13
Issue number6
Early online dateOct 2021
DOIs
Publication statusPublished - Dec 2021

Funding

The authors are thankful to Marianne Baas for helping in fermentation product (gas phase) analysis, to Sanne Vreugdenhil and Maartje Brouwer for their support with the molecular genetic analyses, and to Denise Dorhout for lipid analysis. The authors would like to thank the cruise leader, captain, crew, and scientific participants of Black Sea expedition-2017 (64PE418) on board of the R/V Pelagia for sampling and technical support. This research was supported by the SIAM Gravitation Grant (024.002.002) from the Dutch Ministry of Education, Culture and Science (OCW) to J.S.S.D. and L.V. J.S.S.D. and N.B. received funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program (Grant Agreement No. 694569) funded to JSSD.

FundersFunder number
SIAM Gravitation Grant from the Dutch Ministry of Education, Culture and Science (OCW)024.002.002
European Research Council (ERC) under the European Union694569
European Research Council694569

    UN SDGs

    This output contributes to the following UN Sustainable Development Goals (SDGs)

    1. SDG 14 - Life Below Water
      SDG 14 Life Below Water

    Keywords

    • Sp-nov.
    • Gen. nov.
    • Deep-sea
    • Adaptive-changes
    • Membrane-lipids
    • Atlantic salmon
    • Bacteria
    • Pressure
    • Growth
    • H-2

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