The peplomer protein sequence of the M41 strain of coronavirus IBV and its comparison with Beaudette strains

H. G M Niesters*, J. A. Lenstra, W. J M Spaan, A. J. Zijderveld, N. M C Bleumink-Pluym, F. Hong, G. J M van Scharrenburg, M. C. Horzinek, B. A M van der Zeijst

*Corresponding author for this work

    Research output: Contribution to journalArticleAcademicpeer-review

    Abstract

    The amino acid sequence of the gene for the peplomer protein of the vaccine strain M41 and the Beaudette laboratory strain M42-Salk of avian infectious bronchitis virus (IBV) have been derived from cDNA sequences. As found with other coronaviruses, the peplomer protein carries the epitopes eliciting neutralizing antibodies. The gene encodes a primary translation product of 1162 amino acids with a molecular weight of 128079. The use of a recent algorithm to predict membrane-protein interactions led to the unambiguous localization of the signah peptide and a transmembrane anchor α-helix at the C-terminus. At 50 positions amino acid differences were found between M41 and two Beaudette strains (M42-Salk and M42-Houghton). They are partly clustered in two regions of the protein. These two regions are candidates for neutralization epitopes of the protein.

    Original languageEnglish
    Pages (from-to)253-263
    Number of pages11
    JournalVirus Research
    Volume5
    Issue number2-3
    DOIs
    Publication statusPublished - 1 Jan 1986

    Keywords

    • coronavirus IBV
    • M42
    • peplomer protein
    • strain M41

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