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Soil protistology rebooted: 30 fundamental questions to start with

  • Stefan Geisen*
  • , Edward A.D. Mitchell
  • , David M. Wilkinson
  • , Sina Adl
  • , Michael Bonkowski
  • , Matthew W Brown
  • , Anna Maria Fiore-Donno
  • , Thierry J. Heger
  • , Vincent E.J. Jassey
  • , Valentyna Krashevska
  • , Daniel J.G. Lahr
  • , Katarzyna Marcisz
  • , Matthieu Mulot
  • , Richard Payne
  • , David Singer
  • , O. Roger Anderson
  • , Dan J. Charman
  • , Flemming Ekelund
  • , Bryan S. Griffiths
  • , Regin Rønn
  • Alexey Smirnov, David Bass, Lassaâd Belbahri, Cédric Berney, Quentin Blandenier, Antonis Chatzinotas, Marianne Clarholm, Micah Dunthorn, Alan Feest, Leonardo D. Fernández, Wilhelm Foissner, Bertrand Fournier, Eleni Gentekaki, Michal Hájek, Johannes Helder, Alexandre Jousset, Robert Koller, Santosh Kumar, Antonietta La Terza, Mariusz Lamentowicz, Yuri Mazei, Susana S. Santos, Christophe V.W. Seppey, Frederick W. Spiegel, Julia Walochnik, Anne Winding, Enrique Lara
*Corresponding author for this work
  • Royal Netherlands Academy of Arts and Sciences
  • Wageningen University & Research
  • University of Neuchatel
  • Jardin Botanique de Neuchâtel
  • Liverpool John Moores University
  • University of Lincoln
  • University of Saskatchewan
  • University of Cologne
  • Mississippi State University
  • The University of Applied Sciences Western Switzerland
  • Swiss Federal Institute of Technology Lausanne
  • Swiss Federal Institute for Forest, Snow and Landscape Research
  • University of Göttingen
  • Universidade de São Paulo
  • Adam Mickiewicz University in Poznań
  • University of Bern
  • Sorbonne Université
  • University of York
  • Columbia University
  • University of Exeter
  • University of Copenhagen
  • Scotland's Rural College
  • St. Petersburg State University
  • The Natural History Museum, London
  • Centre for the Environment Fisheries and Aquaculture Science
  • Helmholtz Centre for Environmental Research
  • German Centre for Integrative Biodiversity Research (IDiv) Halle-Jena-Leipzig
  • Swedish University of Agricultural Sciences
  • University of Kaiserslautern
  • University of Bristol
  • Universidad Bernardo O'Higgins
  • University of Salzburg
  • Concordia University
  • Mae Fah Luang University
  • Masaryk University
  • Jülich Research Centre
  • University of Ulsan
  • University of Camerino
  • Lomonosov Moscow State University
  • Penza State University
  • Aarhus University
  • University of Arkansas
  • Medical University of Vienna

Research output: Contribution to journalReview articlepeer-review

Abstract

Protists are the most diverse eukaryotes. These microbes are keystone organisms of soil ecosystems and regulate essential processes of soil fertility such as nutrient cycling and plant growth. Despite this, protists have received little scientific attention, especially compared to bacteria, fungi and nematodes in soil studies. Recent methodological advances, particularly in molecular biology techniques, have made the study of soil protists more accessible, and have created a resurgence of interest in soil protistology. This ongoing revolution now enables comprehensive investigations of the structure and functioning of soil protist communities, paving the way to a new era in soil biology. Instead of providing an exhaustive review, we provide a synthesis of research gaps that should be prioritized in future studies of soil protistology to guide this rapidly developing research area. Based on a synthesis of expert opinion we propose 30 key questions covering a broad range of topics including evolution, phylogenetics, functional ecology, macroecology, paleoecology, and methodologies. These questions highlight a diversity of topics that will establish soil protistology as a hub discipline connecting different fundamental and applied fields such as ecology, biogeography, evolution, plant-microbe interactions, agronomy, and conservation biology. We are convinced that soil protistology has the potential to be one of the most exciting frontiers in biology.

Original languageEnglish
Pages (from-to)94-103
Number of pages10
JournalSoil Biology and Biochemistry
Volume111
DOIs
Publication statusPublished - 1 Aug 2017

Keywords

  • Biodiversity
  • Food web
  • Functional diversity
  • Microbial interactions
  • Protozoa
  • Soil protists

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