TY - JOUR
T1 - Point spread function based image reconstruction in optical projection tomography
AU - Trull, Anna Katharina
AU - Horst, Jelle van der
AU - Palenstijn, Willem Jan
AU - Vliet, Lucas J van
AU - Leeuwen, Tristan van
AU - Kalkman, Jeroen
PY - 2017
Y1 - 2017
N2 - Abstract As a result of the shallow depth of focus of the optical imaging system, the use of standard filtered back projection in optical projection tomography causes space-variant tangential blurring that increases with the distance to the rotation axis. We present a novel optical tomographic image reconstruction technique that incorporates the point spread function (PSF) of the imaging lens in an iterative reconstruction. The technique is demonstrated using numerical simulations, tested on experimental optical projection tomography data of single fluorescent beads, and applied to high-resolution emission optical projection tomography imaging of an entire zebrafish larva. Compared to filtered back projection our results show greatly reduced radial and tangential blurring over the entire 5.2 x 5.2 mm 2 field of view, and a significantly improved signal to noise ratio.
AB - Abstract As a result of the shallow depth of focus of the optical imaging system, the use of standard filtered back projection in optical projection tomography causes space-variant tangential blurring that increases with the distance to the rotation axis. We present a novel optical tomographic image reconstruction technique that incorporates the point spread function (PSF) of the imaging lens in an iterative reconstruction. The technique is demonstrated using numerical simulations, tested on experimental optical projection tomography data of single fluorescent beads, and applied to high-resolution emission optical projection tomography imaging of an entire zebrafish larva. Compared to filtered back projection our results show greatly reduced radial and tangential blurring over the entire 5.2 x 5.2 mm 2 field of view, and a significantly improved signal to noise ratio.
KW - image reconstruction techniques
KW - inverse problems
KW - tomographic image processing
U2 - 10.1088/1361-6560/aa8945
DO - 10.1088/1361-6560/aa8945
M3 - Article
SN - 0031-9155
VL - 62
JO - Physics in Medicine and Biology
JF - Physics in Medicine and Biology
IS - 19
M1 - 7784
ER -