Manipulation of the coronavirus genome using targeted recombination with interspecies chimeric coronaviruses

C.A.M. de Haan, B.J. Haijema, P.S. Masters, P.J.M. Rottier

    Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

    Abstract

    Targeted RNA recombination has proven to be a powerful tool for the genetic engineering of the coronavirus genome, particularly in its 3′ part. Here we describe procedures for the generation of recombinant and mutant mouse hepatitis virus and feline infectious peritonitis virus. Key to the two-step method is the efficient selection of recombinant viruses based on host cell switching. The first step consists of the preparation—using this selection principle—of an interspecies chimeric coronavirus. In this virus the ectodomain of the spike glycoprotein is replaced by that of a coronavirus with a different species tropism. In the second step this chimeric virus is used as the recipient for recombination with synthetic donor RNA carrying the original spike gene. Recombinant viruses are then isolated on the basis of their regained natural (e.g., murine or feline) cell tropism. Additional mutations created in the donor RNA can be co-incorporated into the recombinant virus in order to generate mutant viruses.

    Original languageEnglish
    Title of host publicationSARS- and Other Coronaviruses
    Subtitle of host publicationLaboratory Protocols
    EditorsDave Cavanagh
    PublisherHumana Press
    Chapter17
    Pages229-236
    Number of pages7
    ISBN (Electronic)978-1-59745-181-9
    ISBN (Print)978-1-58829-867-6
    DOIs
    Publication statusPublished - 2008

    Publication series

    NameMethods in Molecular Biology
    PublisherHumana Press
    Volume454
    ISSN (Print)1064-3745

    Keywords

    • coronavirus
    • mouse hepatitis virus
    • feline infectious peritonitis virus
    • reverse genetics
    • targeted RNA recombination
    • host cell switching
    • tropism

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