Late-Holocene succession of dinoflagellates in an Antarctic fjord using a multi-proxy approach: Paleoenvironmental genomics, lipid biomarkers and palynomorphs

  • A.C. Boere
  • , B. Abbas
  • , W. Irene C Rijpstra
  • , G.J.M. Versteegh
  • , J.K. Volkman
  • , J.S. Sinninghe Damsté
  • , M.J.L. Coolen

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Recent work has shown that paleoenvironmental genomics, i.e. the application of genomic tools to analyze preserved DNA in sedimentary records, is a promising approach to reconstruct the diversity of past planktonic communities. This provides information about past ecological and environmental changes. A major advantage of this approach is that individual species, including those that did not leave other characteristic markers, can be identified. In this study, we determined which dinoflagellate marker (i.e. 18S rDNA, dinosterol or dinocysts) provided the most detailed information about the late-Holocene succession of dinoflagellates in an Antarctic Fjord (Ellis Fjord, Vestfold Hills). The preserved rDNA revealed two intervals in the 2750-year-old sediment record. The dinoflagellate diversity was the highest until ∼1850 cal yr bp and included phylotypes related to known dinosterol producers. A lower concentration of dinosterol in sediments
Original languageEnglish
Pages (from-to)265-281
Number of pages17
JournalGeobiology
Volume7
Issue number3
DOIs
Publication statusPublished - Jun 2009

Keywords

  • lipid
  • protozoal DNA
  • protozoal RNA
  • ribosome DNA
  • RNA 18S
  • animal
  • Antarctica
  • article
  • biodiversity
  • chemistry
  • cluster analysis
  • dinoflagellate
  • DNA sequence
  • genetics
  • isolation and purification
  • molecular genetics
  • nucleotide sequence
  • parasitology
  • phylogeny
  • RNA gene
  • sediment

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