Interpretability-Guided Data Augmentation for Robust Segmentation in Multi-centre Colonoscopy Data

Valentina Corbetta*, Regina Beets-Tan, Wilson Silva

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

Multi-centre colonoscopy images from various medical centres exhibit distinct complicating factors and overlays that impact the image content, contingent on the specific acquisition centre. Existing Deep Segmentation networks struggle to achieve adequate generalizability in such data sets, and the currently available data augmentation methods do not effectively address these sources of data variability. As a solution, we introduce an innovative data augmentation approach centred on interpretability saliency maps, aimed at enhancing the generalizability of Deep Learning models within the realm of multi-centre colonoscopy image segmentation. The proposed augmentation technique demonstrates increased robustness across different segmentation models and domains. Thorough testing on a publicly available multi-centre dataset for polyp detection demonstrates the effectiveness and versatility of our approach, which is observed both in quantitative and qualitative results. The code is publicly available at: https://github.com/nki-radiology/interpretability_augmentation.

Original languageEnglish
Title of host publicationMachine Learning in Medical Imaging
EditorsXiaohuan Cao, Xuanang Xu, Islem Rekik, Zhiming Cui, Xi Ouyang
Place of PublicationCham
PublisherSpringer
Pages330-340
Number of pages11
Edition1
ISBN (Electronic)978-3-031-45673-2
ISBN (Print)978-3-031-45672-5
DOIs
Publication statusPublished - 15 Oct 2023

Publication series

NameLecture Notes in Computer Science
Volume14348
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Bibliographical note

Publisher Copyright:
© 2024, The Author(s), under exclusive license to Springer Nature Switzerland AG.

Funding

Research at the Netherlands Cancer Institute is supported by grants from the Dutch Cancer Society, the Dutch Ministry of Health, Welfare and Sport and private sectors.

FundersFunder number
Ministerie van Volksgezondheid, Welzijn en Sport
KWF Kankerbestrijding

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