Abstract
The clinical prospects of cancer nanomedicines depend on effective patient stratification. Here we report the identification of predictive biomarkers of the accumulation of nanomedicines in tumour tissue. By using supervised machine learning on data of the accumulation of nanomedicines in tumour models in mice, we identified the densities of blood vessels and of tumour-associated macrophages as key predictive features. On the basis of these two features, we derived a biomarker score correlating with the concentration of liposomal doxorubicin in tumours and validated it in three syngeneic tumour models in immunocompetent mice and in four cell-line-derived and six patient-derived tumour xenografts in mice. The score effectively discriminated tumours according to the accumulation of nanomedicines (high versus low), with an area under the receiver operating characteristic curve of 0.91. Histopathological assessment of 30 tumour specimens from patients and of 28 corresponding primary tumour biopsies confirmed the score’s effectiveness in predicting the tumour accumulation of liposomal doxorubicin. Biomarkers of the tumour accumulation of nanomedicines may aid the stratification of patients in clinical trials of cancer nanomedicines.
| Original language | English |
|---|---|
| Pages (from-to) | 1366-1378 |
| Number of pages | 13 |
| Journal | Nature Biomedical Engineering |
| Volume | 8 |
| Issue number | 11 |
| Early online date | 2024 |
| DOIs | |
| Publication status | Published - Nov 2024 |
Bibliographical note
Publisher Copyright:© The Author(s) 2024.
Funding
The authors acknowledge technical support by D. Mockel, D. Grigoreva and J. Baues. The authors also acknowledge financial support by the European Research Council (European Research Council consolidator grant 864121, Meta-Targeting and project number 101001791), the European Union (Next Generation European Union, National Institute for Cancer Research (Programme EXCELES, ID project no. LX22NPO5102), the German Research Foundation (GRK2375 (project number 331065168), SFB1066 (213555243), KFO5011 (445703531), LA2937/4-1, 322900939, 432698239 and 445703531), the German Federal Ministry of Research and Education (BMBF, Gezielter Wirkstofftransport, PP-TNBC, project number 16GW0319K and STOP-FSGS-01GM2202C), and the Czech Science Foundation (project number 22-12483S). The experiments performed by J.I.M. were funded by AstraZeneca and the AstraZeneca Postdoc Scheme.
| Funders | Funder number |
|---|---|
| European Research Council (European Research Council) | 864121, 101001791 |
| European Union (Next Generation European Union, National Institute for Cancer Research (Programme EXCELES) | LX22NPO5102 |
| German Research Foundation | GRK2375, 331065168, STOP-FSGS-01GM2202C), 445703531, LA2937/4-1, 322900939, 432698239, 16GW0319K |
| German Federal Ministry of Research and Education (BMBF, Gezielter Wirkstofftransport, PP-TNBC) | 16GW0319K, STOP-FSGS-01GM2202C |
| Czech Science Foundation | 22-12483S |
| AstraZeneca | |
| AstraZeneca Postdoc Scheme |