Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification

Evelien M Adriaenssens; Simon Roux; J Rodney Brister; Ilene Karsch-Mizrachi; Jens H Kuhn; Arvind Varsani; Tong Yigang; Alejandro Reyes; Cédric Lood; Elliot J Lefkowitz; Matthew B Sullivan; Robert A Edwards; Peter Simmonds; Luisa Rubino; Sead Sabanadzovic; Mart Krupovic; Bas E Dutilh

doi:10.1038/s41587-023-01844-2

Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification

Evelien M Adriaenssens
, Simon Roux
, J Rodney Brister
, Ilene Karsch-Mizrachi
, Jens H Kuhn
, Arvind Varsani
, Tong Yigang
, Alejandro Reyes
, Cédric Lood
, Elliot J Lefkowitz
, Matthew B Sullivan
, Robert A Edwards
, Peter Simmonds
, Luisa Rubino
, Sead Sabanadzovic
, Mart Krupovic
, Bas E Dutilh

Research output: Contribution to journal › Letter › Academic › peer-review

Original language	English
Pages (from-to)	898-902
Number of pages	5
Journal	Nature Biotechnology
Volume	41
Issue number	7
DOIs	https://doi.org/10.1038/s41587-023-01844-2
Publication status	Published - Jul 2023

Funding

Funders	Funder number
BBSRC Institute Strategic Program Gut Microbes and Health	BB/R012490/1, BBS/E/F/000PR10353, BBS/E/F/000PR10356
Integrated Research Facility at Fort Detrick
National Science Foundation	1759874
National Institutes of Health
U.S. Department of Energy
U.S. Department of Health and Human Services
National Institute of Allergy and Infectious Diseases	HHSN272201800013C
National Institute of Diabetes and Digestive and Kidney Diseases	RC2DK116713
U.S. National Library of Medicine
U.S. Department of Agriculture	58-6066-9-033
Alexander von Humboldt-Stiftung
National Institute of Food and Agriculture	USDA 1021494
Office of Science	DE-AC02-05CH11231
Wellcome Trust	WT108418AIA
Horizon 2020 Framework Programme	955974
Mississippi Agricultural and Forestry Experiment Station, Mississippi State University
Government of the United Kingdom
Joint Genome Institute
Biotechnology and Biological Sciences Research Council
European Research Council	865694
Australian Research Council	DP220102915
Deutsche Forschungsgemeinschaft	U24AI162625, 390713860
Bundesministerium für Bildung und Forschung
KU Leuven	PDMt2/21/038

Keywords

Genome, Viral/genetics
Phylogeny
Databases, Factual

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10.1038/s41587-023-01844-2

s41587-023-01844-2Final published version, 1.59 MBLicence: Taverne

Cite this

Adriaenssens, E. M., Roux, S., Brister, J. R., Karsch-Mizrachi, I., Kuhn, J. H., Varsani, A., Yigang, T., Reyes, A., Lood, C., Lefkowitz, E. J., Sullivan, M. B., Edwards, R. A., Simmonds, P., Rubino, L., Sabanadzovic, S., Krupovic, M., & Dutilh, B. E. (2023). Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification. Nature Biotechnology, 41(7), 898-902. https://doi.org/10.1038/s41587-023-01844-2

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title = "Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification",

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author = "Adriaenssens, \{Evelien M\} and Simon Roux and Brister, \{J Rodney\} and Ilene Karsch-Mizrachi and Kuhn, \{Jens H\} and Arvind Varsani and Tong Yigang and Alejandro Reyes and C{\'e}dric Lood and Lefkowitz, \{Elliot J\} and Sullivan, \{Matthew B\} and Edwards, \{Robert A\} and Peter Simmonds and Luisa Rubino and Sead Sabanadzovic and Mart Krupovic and Dutilh, \{Bas E\}",

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doi = "10.1038/s41587-023-01844-2",

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Adriaenssens, EM, Roux, S, Brister, JR, Karsch-Mizrachi, I, Kuhn, JH, Varsani, A, Yigang, T, Reyes, A, Lood, C, Lefkowitz, EJ, Sullivan, MB, Edwards, RA, Simmonds, P, Rubino, L, Sabanadzovic, S, Krupovic, M & Dutilh, BE 2023, 'Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification', Nature Biotechnology, vol. 41, no. 7, pp. 898-902. https://doi.org/10.1038/s41587-023-01844-2

TY - JOUR

T1 - Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification

AU - Adriaenssens, Evelien M

AU - Roux, Simon

AU - Brister, J Rodney

AU - Karsch-Mizrachi, Ilene

AU - Kuhn, Jens H

AU - Varsani, Arvind

AU - Yigang, Tong

AU - Reyes, Alejandro

AU - Lood, Cédric

AU - Lefkowitz, Elliot J

AU - Sullivan, Matthew B

AU - Edwards, Robert A

AU - Simmonds, Peter

AU - Rubino, Luisa

AU - Sabanadzovic, Sead

AU - Krupovic, Mart

AU - Dutilh, Bas E

PY - 2023/7

Y1 - 2023/7

KW - Genome, Viral/genetics

KW - Phylogeny

KW - Databases, Factual

UR - https://www.scopus.com/pages/publications/85164355746

U2 - 10.1038/s41587-023-01844-2

DO - 10.1038/s41587-023-01844-2

M3 - Letter

C2 - 37430074

SN - 1087-0156

VL - 41

SP - 898

EP - 902

JO - Nature Biotechnology

JF - Nature Biotechnology

IS - 7

ER -

Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification

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Keywords

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Cite this