Genomic and Postgenomic Diversity of Fungal Plant Biomass Degradation Approaches

Ronald P. de Vries*, Miia R. Mäkelä

*Corresponding author for this work

Research output: Contribution to journalReview articlepeer-review

Abstract

Plant biomass degradation by fungi is a widely studied and applied field of science, due to its relevance for the global carbon cycle and many biotechnological applications. Before the genome era, many of the in-depth studies focused on a relatively small number of species, whereas now, many species can be addressed in detail, revealing the large variety in the approach used by fungi to degrade plant biomass. This variation is found at many levels and includes genomic adaptation to the preferred biomass component, but also different approaches to degrade this component by diverse sets of activities encoded in the genome. Even larger differences have been observed using transcriptome and proteome studies, even between closely related species, suggesting a high level of adaptation in individual species. A better understanding of the drivers of this diversity could be highly valuable in developing more efficient biotechnology approaches for the enzymatic conversion of plant biomass.

Original languageEnglish
Pages (from-to)487-499
Number of pages13
JournalTrends in Microbiology
Volume28
Issue number6
DOIs
Publication statusPublished - 1 Jun 2020

Funding

The Academy of Finland grant no. 308284 to M.R.M. is acknowledged.

Keywords

  • CAZy
  • enzymes
  • fungi
  • plant biomass degradation
  • regulation

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