Evolution of a zoonotic pathogen: investigating prophage diversity in enterohaemorrhagic Escherichia coli O157 by long-read sequencing

Keyphrases

• Zoonotic Pathogens 100%
• Prophage 100%
• Enterohemorrhagic Escherichia Coli 100%
• Long-read Sequencing 100%
• Stx2c 40%
• Shiga Toxin 30%
• Cattle 10%
• Phylogeny 10%
• Limited Value 10%
• Single-molecule Sequencing 10%
• Virulence 10%
• Genome Analysis 10%
• Bacteriophage 10%
• Prediction Accuracy 10%
• Phage Type 10%
• Toxinotype 10%
• Clonal Groups 10%
• Pathogenic Potential 10%
• Reference Strain 10%
• Structural Genes 10%
• Insertion Sequence 10%
• Chromosomal Location 10%
• Core Genome 10%
• Short-read Sequencing 10%
• Sequencing Platforms 10%
• Excisionase 10%
• Genetic Content 10%
• Pacific Biosciences 10%
• Prophage Regions 10%
• Stx2a 10%
• Stx1a 10%
• Prophage Integration 10%
• Cryptic Prophage 10%

Immunology and Microbiology

• Zoonotic 100%
• Escherichia Coli O157:H7 100%
• Prophage 100%
• Infectious Agent 100%
• Enterohemorrhagic Escherichia Coli 100%
• Shiga Toxin 23%
• Bacteriophage 15%
• Pathogenic Potential 7%
• Gene Insertion Sequence 7%
• Structural Gene 7%
• Cladistics 7%

Biochemistry, Genetics and Molecular Biology

• Enterohemorrhagic Escherichia Coli 100%
• Infectious Agent 100%
• Escherichia Coli O157 100%
• Prophage 100%
• Shiga Toxin 23%
• Bacteriophage 15%
• Genetics 7%
• Insertion Sequence 7%
• Single Molecule Real Time Sequencing 7%
• Structural Gene 7%
• Cladistics 7%