Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride

Xiaoqian Shi-Kunne; Michael F Seidl; Luigi Faino; Bart P H J Thomma

doi:10.1128/genomeA.00287-15

Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride

Xiaoqian Shi-Kunne, Michael F Seidl, Luigi Faino, Bart P H J Thomma

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

An unknown fungus has been isolated as a contaminant of in vitro-grown fungal cultures. In an attempt to identify the contamination, we isolated the causal agent and performed whole-genome sequencing. BLAST analysis of the internal transcribed spacer (ITS) sequence against the NCBI database showed 100% identity to Trichoderma atroviride, and further alignment of the genome assembly confirmed the unknown fungus to be T. atroviride. Here, we report the draft genome sequence of a T. atroviride strain.

Original language	English
Journal	Genome Announcements
Volume	3
Issue number	3
DOIs	https://doi.org/10.1128/genomeA.00287-15
Publication status	Published - 2015
Externally published	Yes

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title = "Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride",

abstract = "An unknown fungus has been isolated as a contaminant of in vitro-grown fungal cultures. In an attempt to identify the contamination, we isolated the causal agent and performed whole-genome sequencing. BLAST analysis of the internal transcribed spacer (ITS) sequence against the NCBI database showed 100% identity to Trichoderma atroviride, and further alignment of the genome assembly confirmed the unknown fungus to be T. atroviride. Here, we report the draft genome sequence of a T. atroviride strain. ",

author = "Xiaoqian Shi-Kunne and Seidl, {Michael F} and Luigi Faino and Thomma, {Bart P H J}",

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AU - Faino, Luigi

AU - Thomma, Bart P H J

PY - 2015

Y1 - 2015

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AB - An unknown fungus has been isolated as a contaminant of in vitro-grown fungal cultures. In an attempt to identify the contamination, we isolated the causal agent and performed whole-genome sequencing. BLAST analysis of the internal transcribed spacer (ITS) sequence against the NCBI database showed 100% identity to Trichoderma atroviride, and further alignment of the genome assembly confirmed the unknown fungus to be T. atroviride. Here, we report the draft genome sequence of a T. atroviride strain.

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DO - 10.1128/genomeA.00287-15

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SN - 2169-8287

VL - 3

JO - Genome Announcements

JF - Genome Announcements

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Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride

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