DisVis: Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes

G. C P Van Zundert; A. M J J Bonvin

doi:10.1093/bioinformatics/btv333

DisVis: Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes

G. C P Van Zundert
, A. M J J Bonvin^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

Summary: We present DisVis, a Python package and command line tool to calculate the reduced accessible interaction space of distance-restrained binary protein complexes, allowing for direct visualization and quantification of the information content of the distance restraints. The approach is general and can also be used as a knowledge-based distance energy term in FFT-based docking directly during the sampling stage.

Original language	English
Pages (from-to)	3222-3224
Number of pages	3
Journal	Bioinformatics
Volume	31
Issue number	19
DOIs	https://doi.org/10.1093/bioinformatics/btv333
Publication status	Published - 1 Oct 2015

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title = "DisVis: Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes",

abstract = "Summary: We present DisVis, a Python package and command line tool to calculate the reduced accessible interaction space of distance-restrained binary protein complexes, allowing for direct visualization and quantification of the information content of the distance restraints. The approach is general and can also be used as a knowledge-based distance energy term in FFT-based docking directly during the sampling stage.",

author = "\{Van Zundert\}, \{G. C P\} and Bonvin, \{A. M J J\}",

year = "2015",

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AU - Bonvin, A. M J J

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AB - Summary: We present DisVis, a Python package and command line tool to calculate the reduced accessible interaction space of distance-restrained binary protein complexes, allowing for direct visualization and quantification of the information content of the distance restraints. The approach is general and can also be used as a knowledge-based distance energy term in FFT-based docking directly during the sampling stage.

UR - https://www.scopus.com/pages/publications/84943416685

U2 - 10.1093/bioinformatics/btv333

DO - 10.1093/bioinformatics/btv333

M3 - Article

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JO - Bioinformatics

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DisVis: Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes

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