Dataset of the phospholipidome and transcriptome of Campylobacter jejuni under different growth conditions

Xuefeng Cao; Jos F H M Brouwers; Linda van Dijk; Chris H A van de Lest; Craig T Parker; Steven Huynh; Jos P H van Putten; David J Kelly; Marc M S M Wösten

doi:10.1016/j.dib.2020.106349

Dataset of the phospholipidome and transcriptome of Campylobacter jejuni under different growth conditions

Xuefeng Cao, Jos F H M Brouwers, Linda van Dijk, Chris H A van de Lest, Craig T Parker, Steven Huynh, Jos P H van Putten, David J Kelly, Marc M S M Wösten

Department of Biomolecular Health Sciences, Utrecht University, 3584 CL Utrecht, the Netherlands.
Utrecht University
Produce Safety and Microbiology Research Unit, Agricultural Research Service, U.S. Department of Agriculture, Albany, California 94710, USA.
Department of Molecular Biology and Biotechnology, The University of Sheffield, Firth Court, Western Bank, Sheffield, S10 2TN, UK.

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

The membrane phospholipid composition is not a stable bacterial characteristic but can change in response to altered environmental conditions. Here we provide the dataset of the phospholipidome and transcriptome of the microaerophilic human pathogen Campylobacter jejuni under different environmental conditions. These data have been used in Cao (2020), The unique phospholipidome of the enteric pathogen C. jejuni: Lysolipids are required for motility at low oxygen availability. Here the abundance of each phospholipid is shown during the growth of C. jejuni for 0-108 h under low and high oxygen conditions (0.3 vs 10% O2). The phospholipid data were obtained by applying high performance liquid chromatography tandem-mass spectrometry (LC-MS/MS). The transcriptomic data obtained by RNA-seq show the differential expressed genes between logarithmic and stationary grown bacteria. In addition, our data might serve as a reference information for further in-depth investigation to understand the relation between specific phospholipids and the activity of membrane associated proteins.

Original language	English
Article number	106349
Number of pages	5
Journal	Data in Brief
Volume	33
DOIs	https://doi.org/10.1016/j.dib.2020.106349
Publication status	Published - Dec 2020

Keywords

Campylobacter jejuni
Phospholipidome
Phospholipids
Transcriptome
Growth phase
Oxygen concentration
LC-MS/MS
RNA-seq

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10.1016/j.dib.2020.106349

1-s2.0-S2352340920312427-mainFinal published version, 258 KBLicence: CC BY-NC-ND

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@article{a56b135765454c9387e76075ab27ba36,

title = "Dataset of the phospholipidome and transcriptome of Campylobacter jejuni under different growth conditions",

abstract = "The membrane phospholipid composition is not a stable bacterial characteristic but can change in response to altered environmental conditions. Here we provide the dataset of the phospholipidome and transcriptome of the microaerophilic human pathogen Campylobacter jejuni under different environmental conditions. These data have been used in Cao (2020), The unique phospholipidome of the enteric pathogen C. jejuni: Lysolipids are required for motility at low oxygen availability. Here the abundance of each phospholipid is shown during the growth of C. jejuni for 0-108 h under low and high oxygen conditions (0.3 vs 10\% O2). The phospholipid data were obtained by applying high performance liquid chromatography tandem-mass spectrometry (LC-MS/MS). The transcriptomic data obtained by RNA-seq show the differential expressed genes between logarithmic and stationary grown bacteria. In addition, our data might serve as a reference information for further in-depth investigation to understand the relation between specific phospholipids and the activity of membrane associated proteins.",

keywords = "Campylobacter jejuni, Phospholipidome, Phospholipids, Transcriptome, Growth phase, Oxygen concentration, LC-MS/MS, RNA-seq",

author = "Xuefeng Cao and Brouwers, \{Jos F H M\} and \{van Dijk\}, Linda and \{van de Lest\}, \{Chris H A\} and Parker, \{Craig T\} and Steven Huynh and \{van Putten\}, \{Jos P H\} and Kelly, \{David J\} and W{\"o}sten, \{Marc M S M\}",

note = "{\textcopyright} 2020 The Author(s).",

year = "2020",

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doi = "10.1016/j.dib.2020.106349",

language = "English",

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AU - Cao, Xuefeng

AU - Brouwers, Jos F H M

AU - van Dijk, Linda

AU - van de Lest, Chris H A

AU - Parker, Craig T

AU - Huynh, Steven

AU - van Putten, Jos P H

AU - Kelly, David J

AU - Wösten, Marc M S M

PY - 2020/12

Y1 - 2020/12

N2 - The membrane phospholipid composition is not a stable bacterial characteristic but can change in response to altered environmental conditions. Here we provide the dataset of the phospholipidome and transcriptome of the microaerophilic human pathogen Campylobacter jejuni under different environmental conditions. These data have been used in Cao (2020), The unique phospholipidome of the enteric pathogen C. jejuni: Lysolipids are required for motility at low oxygen availability. Here the abundance of each phospholipid is shown during the growth of C. jejuni for 0-108 h under low and high oxygen conditions (0.3 vs 10% O2). The phospholipid data were obtained by applying high performance liquid chromatography tandem-mass spectrometry (LC-MS/MS). The transcriptomic data obtained by RNA-seq show the differential expressed genes between logarithmic and stationary grown bacteria. In addition, our data might serve as a reference information for further in-depth investigation to understand the relation between specific phospholipids and the activity of membrane associated proteins.

AB - The membrane phospholipid composition is not a stable bacterial characteristic but can change in response to altered environmental conditions. Here we provide the dataset of the phospholipidome and transcriptome of the microaerophilic human pathogen Campylobacter jejuni under different environmental conditions. These data have been used in Cao (2020), The unique phospholipidome of the enteric pathogen C. jejuni: Lysolipids are required for motility at low oxygen availability. Here the abundance of each phospholipid is shown during the growth of C. jejuni for 0-108 h under low and high oxygen conditions (0.3 vs 10% O2). The phospholipid data were obtained by applying high performance liquid chromatography tandem-mass spectrometry (LC-MS/MS). The transcriptomic data obtained by RNA-seq show the differential expressed genes between logarithmic and stationary grown bacteria. In addition, our data might serve as a reference information for further in-depth investigation to understand the relation between specific phospholipids and the activity of membrane associated proteins.

KW - Campylobacter jejuni

KW - Phospholipidome

KW - Phospholipids

KW - Transcriptome

KW - Growth phase

KW - Oxygen concentration

KW - LC-MS/MS

KW - RNA-seq

U2 - 10.1016/j.dib.2020.106349

DO - 10.1016/j.dib.2020.106349

M3 - Article

C2 - 33072826

SN - 2352-3409

VL - 33

JO - Data in Brief

JF - Data in Brief

M1 - 106349

ER -

Dataset of the phospholipidome and transcriptome of Campylobacter jejuni under different growth conditions

Abstract

Keywords

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