TY - JOUR
T1 - Comparing the performance of species distribution models of Zostera marina
T2 - Implications for conservation
AU - Valle, Mireia
AU - van Katwijk, Marieke M.
AU - de Jong, Dick J.
AU - Bouma, Tjeerd J.
AU - Schipper, Aafke M.
AU - Chust, Guillem
AU - Benito, Blas M.
AU - Garmendia, Joxe M.
AU - Borja, Ángel
N1 - Funding Information:
This study was supported by a contract undertaken between the Basque Water Agency–URA and AZTI-Tecnalia ; likewise by the Ministry of Science and Innovation of the Spanish Government (Project Ref.: CTM2011-29473 ). We wish to thank: the Directorate-general for Public Works and Water Management, Division Zeeland of the Ministry of the Infrastructure and Environment (The Netherlands); the Radboud University (Nijmegen, The Netherlands); Bert Brinkman from the Institute for Marine Resources and Ecosystem Studies (The Netherlands); and Annette Wielemaker from the Royal Netherlands Institute for Sea Research (NIOZ). M. Valle has benefited from a PhD Scholarship granted by the Iñaki Goenaga — Technology Centres Foundation. We wish to thank also Professor Michael Collins (School of Ocean and Earth Science, University of Southampton (UK), Estación Marina de Plentzia (University of the Basque Country) and AZTI-Tecnalia (Spain)), for kindly advising us on some details of the manuscript. The comments of two anonymous reviewers have improved considerably the first manuscript draft. This paper is contribution number 617 from AZTI-Tecnalia (Marine Research Division).
PY - 2013/10
Y1 - 2013/10
N2 - Intertidal seagrasses show high variability in their extent and location, with local extinctions and (re-)colonizations being inherent in their population dynamics. Suitable habitats are identified usually using Species Distribution Models (SDM), based upon the overall distribution of the species; thus, accounting solely for spatial variability. To include temporal effects caused by large interannual variability, we constructed SDMs for different combinations and fusions of yearly distribution data. The main objectives were to: (i) assess the spatio-temporal dynamics of an intertidal seagrass bed of Zostera marina; (ii) select the most accurate SDM techniques to model different temporal distribution data subsets of the species; (iii) assess the relative importance of the environmental variables for each data subset; and (iv) evaluate the accuracy of the models to predict species conservation areas, addressing implications for management. To address these objectives, a time series of 14-year distribution data of Zostera marina in the Ems estuary (The Netherlands) was used to build different data subsets: (1) total presence area; (2) a conservative estimate of the total presence area, defined as the area which had been occupied during at least 4. years; (3) core area, defined as the area which had been occupied during at least 2/3 of the total period; and (4-6) three random selections of monitoring years. On average, colonized and disappeared areas of the species in the Ems estuary showed remarkably similar transition probabilities of 12.7% and 12.9%, respectively. SDMs based upon machine-learning methods (Boosted Regression Trees and Random Forest) outperformed regression-based methods. Current velocity and wave exposure were the most important variables predicting the species presence for widely distributed data. Depth and sea floor slope were relevant to predict conservative presence area and core area. It is concluded that, the fusion of the spatial distribution data from four monitoring years could be enough to establish an accurate habitat suitability model of Zostera marina in the Ems estuary. The methodology presented offers a promising tool for selecting realistic conservation areas for those species that show high population dynamics, such as many estuarine and coastal species.
AB - Intertidal seagrasses show high variability in their extent and location, with local extinctions and (re-)colonizations being inherent in their population dynamics. Suitable habitats are identified usually using Species Distribution Models (SDM), based upon the overall distribution of the species; thus, accounting solely for spatial variability. To include temporal effects caused by large interannual variability, we constructed SDMs for different combinations and fusions of yearly distribution data. The main objectives were to: (i) assess the spatio-temporal dynamics of an intertidal seagrass bed of Zostera marina; (ii) select the most accurate SDM techniques to model different temporal distribution data subsets of the species; (iii) assess the relative importance of the environmental variables for each data subset; and (iv) evaluate the accuracy of the models to predict species conservation areas, addressing implications for management. To address these objectives, a time series of 14-year distribution data of Zostera marina in the Ems estuary (The Netherlands) was used to build different data subsets: (1) total presence area; (2) a conservative estimate of the total presence area, defined as the area which had been occupied during at least 4. years; (3) core area, defined as the area which had been occupied during at least 2/3 of the total period; and (4-6) three random selections of monitoring years. On average, colonized and disappeared areas of the species in the Ems estuary showed remarkably similar transition probabilities of 12.7% and 12.9%, respectively. SDMs based upon machine-learning methods (Boosted Regression Trees and Random Forest) outperformed regression-based methods. Current velocity and wave exposure were the most important variables predicting the species presence for widely distributed data. Depth and sea floor slope were relevant to predict conservative presence area and core area. It is concluded that, the fusion of the spatial distribution data from four monitoring years could be enough to establish an accurate habitat suitability model of Zostera marina in the Ems estuary. The methodology presented offers a promising tool for selecting realistic conservation areas for those species that show high population dynamics, such as many estuarine and coastal species.
KW - Conservation
KW - Dynamics
KW - Ecosystem management
KW - Intertidal
KW - Seagrasses
KW - Wadden Sea
UR - http://www.scopus.com/inward/record.url?scp=84886292676&partnerID=8YFLogxK
U2 - 10.1016/j.seares.2013.03.002
DO - 10.1016/j.seares.2013.03.002
M3 - Article
AN - SCOPUS:84886292676
SN - 1385-1101
VL - 83
SP - 56
EP - 64
JO - Journal of Sea Research
JF - Journal of Sea Research
ER -