Comparative analyses of prophage-like elements present in two Lactococcus lactis strains

Marco Ventura; Aldert Zomer; Carlos Canchaya; Mary O'Connell-Motherway; Oscar Kuipers; Francesca Turroni; Angela Ribbera; Elena Foroni; Girbe Buist; Udo Wegmann; Claire Shearman; Michael J Gasson; Gerald F Fitzgerald; Jan Kok; Douwe van Sinderen

doi:10.1128/AEM.01273-07

Comparative analyses of prophage-like elements present in two Lactococcus lactis strains

Marco Ventura, Aldert Zomer, Carlos Canchaya, Mary O'Connell-Motherway, Oscar Kuipers, Francesca Turroni, Angela Ribbera, Elena Foroni, Girbe Buist, Udo Wegmann, Claire Shearman, Michael J Gasson, Gerald F Fitzgerald, Jan Kok, Douwe van Sinderen

National University of Ireland, Galway

Research output: Contribution to journal › Article › Academic › peer-review

Abstract

In this study, we describe the genetic organizations of six and five apparent prophage-like elements present in the genomes of the Lactococcus lactis subsp. cremoris strains MG1363 and SK11, respectively. Phylogenetic investigation as well bioinformatic analyses indicates that all 11 prophages belong to subdivisions of the lactococcal P335 group of temperate bacteriophages.

Original language	English
Pages (from-to)	7771-80
Number of pages	10
Journal	Applied and Environmental Microbiology
Volume	73
Issue number	23
DOIs	https://doi.org/10.1128/AEM.01273-07
Publication status	Published - Dec 2007

Keywords

Bacteriophages
Chromosome Mapping
Computational Biology
Gene Expression Profiling
Genome, Bacterial
Lactococcus lactis
Open Reading Frames
Phylogeny
Prophages
Species Specificity

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Ventura, M., Zomer, A., Canchaya, C., O'Connell-Motherway, M., Kuipers, O., Turroni, F., Ribbera, A., Foroni, E., Buist, G., Wegmann, U., Shearman, C., Gasson, M. J., Fitzgerald, G. F., Kok, J., & van Sinderen, D. (2007). Comparative analyses of prophage-like elements present in two Lactococcus lactis strains. Applied and Environmental Microbiology, 73(23), 7771-80. https://doi.org/10.1128/AEM.01273-07

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title = "Comparative analyses of prophage-like elements present in two Lactococcus lactis strains",

abstract = "In this study, we describe the genetic organizations of six and five apparent prophage-like elements present in the genomes of the Lactococcus lactis subsp. cremoris strains MG1363 and SK11, respectively. Phylogenetic investigation as well bioinformatic analyses indicates that all 11 prophages belong to subdivisions of the lactococcal P335 group of temperate bacteriophages.",

keywords = "Bacteriophages, Chromosome Mapping, Computational Biology, Gene Expression Profiling, Genome, Bacterial, Lactococcus lactis, Open Reading Frames, Phylogeny, Prophages, Species Specificity",

author = "Marco Ventura and Aldert Zomer and Carlos Canchaya and Mary O'Connell-Motherway and Oscar Kuipers and Francesca Turroni and Angela Ribbera and Elena Foroni and Girbe Buist and Udo Wegmann and Claire Shearman and Gasson, {Michael J} and Fitzgerald, {Gerald F} and Jan Kok and {van Sinderen}, Douwe",

year = "2007",

month = dec,

doi = "10.1128/AEM.01273-07",

language = "English",

volume = "73",

pages = "7771--80",

journal = "Applied and Environmental Microbiology",

issn = "0099-2240",

publisher = "American Society for Microbiology",

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Ventura, M, Zomer, A, Canchaya, C, O'Connell-Motherway, M, Kuipers, O, Turroni, F, Ribbera, A, Foroni, E, Buist, G, Wegmann, U, Shearman, C, Gasson, MJ, Fitzgerald, GF, Kok, J & van Sinderen, D 2007, 'Comparative analyses of prophage-like elements present in two Lactococcus lactis strains', Applied and Environmental Microbiology, vol. 73, no. 23, pp. 7771-80. https://doi.org/10.1128/AEM.01273-07

TY - JOUR

T1 - Comparative analyses of prophage-like elements present in two Lactococcus lactis strains

AU - Ventura, Marco

AU - Zomer, Aldert

AU - Canchaya, Carlos

AU - O'Connell-Motherway, Mary

AU - Kuipers, Oscar

AU - Turroni, Francesca

AU - Ribbera, Angela

AU - Foroni, Elena

AU - Buist, Girbe

AU - Wegmann, Udo

AU - Shearman, Claire

AU - Gasson, Michael J

AU - Fitzgerald, Gerald F

AU - Kok, Jan

AU - van Sinderen, Douwe

PY - 2007/12

Y1 - 2007/12

N2 - In this study, we describe the genetic organizations of six and five apparent prophage-like elements present in the genomes of the Lactococcus lactis subsp. cremoris strains MG1363 and SK11, respectively. Phylogenetic investigation as well bioinformatic analyses indicates that all 11 prophages belong to subdivisions of the lactococcal P335 group of temperate bacteriophages.

AB - In this study, we describe the genetic organizations of six and five apparent prophage-like elements present in the genomes of the Lactococcus lactis subsp. cremoris strains MG1363 and SK11, respectively. Phylogenetic investigation as well bioinformatic analyses indicates that all 11 prophages belong to subdivisions of the lactococcal P335 group of temperate bacteriophages.

KW - Bacteriophages

KW - Chromosome Mapping

KW - Computational Biology

KW - Gene Expression Profiling

KW - Genome, Bacterial

KW - Lactococcus lactis

KW - Open Reading Frames

KW - Phylogeny

KW - Prophages

KW - Species Specificity

U2 - 10.1128/AEM.01273-07

DO - 10.1128/AEM.01273-07

M3 - Article

C2 - 17933937

SN - 0099-2240

VL - 73

SP - 7771

EP - 7780

JO - Applied and Environmental Microbiology

JF - Applied and Environmental Microbiology

IS - 23

ER -

Comparative analyses of prophage-like elements present in two Lactococcus lactis strains

Abstract

Keywords

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