Abstract
Introduction: Chimeric antigen receptor (CAR) T-cell therapy is a promising and innovative cancer therapy. However, immunosuppressive tumor microenvironments (TME) limit T cell persistence and durable efficacy. Here, we aimed to identify and target immunosuppressive factors in the TME of neuroblastoma, a pediatric extracranial solid tumor, to improve CAR-T efficacy. Methods: Immunosuppressive factors were identified using a multi-omics approach, including single-cell RNA sequencing (scRNA-seq) of 24 neuroblastoma tumors, published bulk-RNA sequencing datasets, and mass-spectrometry of patient-derived tumoroid models. Candidate targets were validated with functional assays in vitro and in vivo. Protein degradation of the top immunosuppressive target by PROTAC technology was used to evaluate the effect on CAR T-cell activity. Results: ScRNA-seq revealed 13 immunosuppressive interactions in the TME of neuroblastoma, two effectors of which, Midkine (MDK) and Macrophage Migration Inhibitory Factor (MIF), were validated as candidate targets across multiple published datasets. Both factors were among the top 6 % of most abundantly secreted factors by patient-derived tumoroid models, substantiating their potential relevance in the TME. In vitro and in vivo functional assays confirmed MIF to be a potent inhibitor of CAR T-cell activation and killing capacity. To translate these findings into a potentially clinically applicable treatment, we explored MIF targeting by PROTAC technology, which significantly enhanced activation of CAR T-cells targeting GPC2 and B7-H3. Conclusion: By defining the immunosuppressive effects of neuroblastoma's TME on CAR T-cell efficacy, revealing the pivotal role of MIF, we provide an analytic pipeline and therapeutic strategy for improving adoptive cell therapies for this pediatric malignancy and potentially other solid tumors.
Original language | English |
---|---|
Article number | 115263 |
Journal | European Journal of Cancer |
Volume | 218 |
DOIs | |
Publication status | Published - 11 Mar 2025 |
Bibliographical note
Publisher Copyright:© 2025 The Authors
Funding
K.R.B. and G.P.P have applied for patents for the discovery and development of immunotherapies for cancer, including patents related to GPC2-directed immunotherapies. K.R.B receives royalties from Tmunity/Kite Pharma and ConjugateBio, Inc. for licensing of GPC2-related technology and funding from Tmunity/Kite Pharma and ConjugateBio, Inc. for research on GPC2-directed immunotherapies. K.R.B. is on the ConjugateBio Scientific Advisory Board. M.B. holds patents pertinent to cellular immunotherapy development and manufacture, and has consulted for Lava Therapeutics. J.A. holds founder stock in Autolus ltd, consults for Roche and BMS, and holds patents in CAR-T design. J.M. has received research funding from Roche for in vitro work. All remaining authors have declared no conflicts of interest
Funders | Funder number |
---|---|
Great Ormond Street NIHR Biomedical Research centre - KiKa | |
Singapore Immu-nology Network (SIgN) , Agency for Science, Technology and Research (A*STAR) | |
Biomedical Research Council (BMRC) | H22J2a0043 |
Singapore National Medical Research Council (NMRC) | MOH-001401-00 |
Keywords
- CAR T-cell therapy
- Immunosuppressive tumor microenvironment
- MIF
- Neuroblastoma
- PROTAC