An integrated approach towards extracting structural characteristics of chlorosomes from a bchQ mutant of Chlorobaculum tepidum

Lolita Dsouza, Xinmeng Li, Vesna Erić, Annemarie Huijser, Thomas L.C. Jansen, Alfred R. Holzwarth, Francesco Buda, Donald A. Bryant, Salima Bahri, Karthick Babu Sai Sankar Gupta, G. J.Agur Sevink*, Huub J.M. de Groot*

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

Abstract

Chlorosomes, the photosynthetic antenna complexes of green sulfur bacteria, are paradigms for light-harvesting elements in artificial designs, owing to their efficient energy transfer without protein participation. We combined magic angle spinning (MAS) NMR, optical spectroscopy and cryogenic electron microscopy (cryo-EM) to characterize the structure of chlorosomes from a bchQ mutant of Chlorobaculum tepidum. The chlorosomes of this mutant have a more uniform composition of bacteriochlorophyll (BChl) with a predominant homolog, [8Ethyl, 12Ethyl] BChl c, compared to the wild type (WT). Nearly complete 13C chemical shift assignments were obtained from well-resolved homonuclear 13C-13C RFDR data. For proton assignments heteronuclear 13C-1H (hCH) data sets were collected at 1.2 GHz spinning at 60 kHz. The CHHC experiments revealed intermolecular correlations between 132/31, 132/32, and 121/31, with distance constraints of less than 5 Å. These constraints indicate the syn-anti parallel stacking motif for the aggregates. Fourier transform cryo-EM data reveal an axial repeat of 1.49 nm for the helical tubular aggregates, perpendicular to the inter-tube separation of 2.1 nm. This axial repeat is different from WT and is in line with BChl syn-anti stacks running essentially parallel to the tube axis. Such a packing mode is in agreement with the signature of the Qy band in circular dichroism (CD). Combining the experimental data with computational insight suggests that the packing for the light-harvesting function is similar between WT and bchQ, while the chirality within the chlorosomes is modestly but detectably affected by the reduced compositional heterogeneity in bchQ.

Original languageEnglish
Pages (from-to)15856-15867
Number of pages12
JournalPhysical Chemistry Chemical Physics
Volume26
Issue number22
Early online date28 Mar 2024
DOIs
Publication statusPublished - Jun 2024

Bibliographical note

Publisher Copyright:
© 2024 The Royal Society of Chemistry.

Funding

This publication is part of the project “The molecular mechanism of long-range exciton transfer in chiral self-assembled supramolecular matrices” (with project number 715.018.001) of the 29th research program NWO TOP which is financed by the Dutch Research Council (NWO). The high-field NMR experiments and SB were supported by uNMR-NL, the National Roadmap Large-Scale NMR Facility of the Netherlands (NWO grant 184.032.207) and the uNMR-NL grid (NWO grant 184.035.002). We extend our sincere acknowledgement to the cryo-EM facility Leiden (NeCEN). Studies in the laboratories of D.A.B were supported by grant DE-FG02-94ER20137 from the Photosynthetic Systems Program, Division of Chemical Sciences, Geosciences, and Biosciences (CSGB), Office of Basic Energy Sciences of the U. S. Department of Energy.

FundersFunder number
U.S. Department of Energy
Chemical Sciences, Geosciences, and Biosciences Division
Basic Energy Sciences
Nederlandse Organisatie voor Wetenschappelijk Onderzoek184.035.002, 184.032.207, DE-FG02-94ER20137

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