Adjoint operators enable fast and amortized machine learning based Bayesian uncertainty quantification

Rafael Orozco*, Ali Siahkoohi, Gabrio Rizzuti, Tristan van Leeuwen, Felix Herrmann

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Abstract

Machine learning algorithms are powerful tools in Bayesian uncertainty quantification (UQ) of inverse problems. Unfortunately, when using these algorithms medical imaging practitioners are faced with the challenging task of manually defining neural networks that can handle complicated inputs such as acoustic data. This task needs to be replicated for different receiver types or configurations since these change the dimensionality of the input. We propose to first transform the data using the adjoint operator —ex: time reversal in photoacoustic imaging (PAI) or back-projection in computer tomography (CT) imaging — then continue posterior inference using the adjoint data as an input now that it has been standardized to the size of the unknown model. This adjoint preprocessing technique has been used in previous works but with minimal discussion on if it is biased. In this work, we prove that conditioning on adjoint data is unbiased for a certain class of inverse problems. We then demonstrate with two medical imaging examples (PAI and CT) that adjoints enable two things: Firstly, adjoints partially undo the physics of the forward operator resulting in faster convergence of a learned Bayesian UQ technique. Secondly, the algorithm is now robust to changes in the observed data caused by different transducer subsampling in PAI and number of angles in CT. Our adjoint-based Bayesian inference method results in point estimates that are faster to compute than traditional baselines and show higher SSIM metrics, while also providing validated UQ.

Original languageEnglish
Title of host publicationMedical Imaging 2023
Subtitle of host publicationImage Processing
EditorsOlivier Colliot, Ivana Isgum
PublisherSPIE
ISBN (Electronic)9781510660335
DOIs
Publication statusPublished - 2023
EventMedical Imaging 2023: Image Processing - San Diego, United States
Duration: 19 Feb 202323 Feb 2023

Publication series

NameProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume12464
ISSN (Print)1605-7422

Conference

ConferenceMedical Imaging 2023: Image Processing
Country/TerritoryUnited States
CitySan Diego
Period19/02/2323/02/23

Keywords

  • Amortized Inference
  • Bayesian Inference
  • Deep Learning
  • Inverse Problems
  • Machine Learning
  • Medical Imaging
  • Normalizing Flows
  • Uncertainty Quantification

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